Thesis Detail - Razi University
Thesis Details
Defense Date:
2025/29/11
Abstract
Tautomerism is one
of the fundamental concepts in organic chemistry and pharmaceutical sciences,
exerting a significant influence on the stability,
biological activity, and pharmacological behavior of drugs. This phenomenon
can alter various pharmacokinetic and
pharmacodynamic properties such as absorption, metabolism, toxicity, and blood–brain barrier permeability.
Moreover, cytochrome P450 enzymes, as the primary systems involved in drug metabolism, play a crucial role
in the oxidation and structural transformation of pharmaceutical
compounds
In
this study, the tautomeric behavior and structural properties of two drug
compounds, Guanabenz and its oxime derivative Guanoxabenz, were investigated
using computational chemistry methods. The main objective of this research was
to understand the relative stability, equilibrium tendency, and environmental
effects on the tautomeric balance of these compounds. Initially, all possible
tautomeric structures of Guanabenz and Guanoxabenz were theoretically designed
and optimized. Subsequently, Density Functional Theory (DFT) calculations were
performed at the B3LYP/6-31G* level to determine the minimum energy structures
and evaluate thermodynamic parameters such as Gi free energy and dipole
moment. In the next step, the molecular docking of Guanabenz and its oxidation
pathway were analyzed.
Quantum
chemical results revealed that among the four tautomers of Guanabenz, the G4
structure exhibited the highest polarity and hydrophilicity, while G1, with the
lowest dipole moment, showed the greatest hydrophobicity and consequently
higher thermodynamic stability under biological conditions. The equilibrium
analysis indicated that although G4 is relatively more stable, G1 is the most
thermodynamically favored form in biological environments. Docking studies
demonstrated that G3 exhibited the strongest interaction with the ??-adrenergic
receptor, indicating that it is the most active tautomer in terms of
drug–receptor binding. These findings provided a clear understanding of the
structural and functional behavior of Guanabenz tautomers in different media.
Furthermore,
the computational analysis of Guanabenz’s oxime derivative, Guanoxabenz, showed
that the GO1 tautomer is the most stable structure among the others, except in
the gas phase, where GO3trans exhibits the highest stability. In terms of
polarity, GO2, with a dipole moment of 5.09 Debye in aqueous medium, was
identified as the most hydrophilic tautomer, while GO1, with a dipole moment of
3.20 Debye, was the most hydrophobic. In addition, the reaction pathway
analysis indicated that during the oxidation process of Guanabenz, the direct
N-oxidation accompanied by proton transfer is the most probable mechanism
compared to the hydrogen abstraction pathway.
Overall,
the findings of this research demonstrate that tautomerism and its related
electronic characteristics play a crucial role in determining the stability,
polarity, and biological behavior of Guanabenz and Guanoxabenz, and these
insights can be effectively applied to the rational design of new derivatives
with improved stability and pharmacological properties.
